PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5DL_67A38E9B7.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 154aa    MW: 17093.2 Da    PI: 9.0804
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5DL_67A38E9B7.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.41.3e-123089362
                           XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
                           e +r rrk++NRe+ArrsR RK++ ++ L   v++L+++ +++   l + +++  +l+++
  Traes_5DL_67A38E9B7.1 30 EKRRKRRKESNRESARRSRVRKQQHLDDLSSQVDQLKNQSQQMNMVLGMTTQNLVALQAQ 89
                           5689*************************************9998888777776666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.4E-112892IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.6453093IPR004827Basic-leucine zipper domain
PfamPF001701.3E-93078IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-93289No hitNo description
SuperFamilySSF579593.87E-113287No hitNo description
CDDcd147027.58E-153372No hitNo description
PROSITE patternPS0003603550IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MSSGTSFASS QGTRSSRSAE DCPDLRAQME KRRKRRKESN RESARRSRVR KQQHLDDLSS  60
QVDQLKNQSQ QMNMVLGMTT QNLVALQAQN SVMQTQKMEL ESRLCALGEI ICCMNSITNT  120
VNPTAAMGAT ASSAYDVFGA GSAWSQPIDL YQCF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13036KRRKRRK
23237RKRRKE
34450RRSRVRK
44451RRSRVRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3644280.0AK364428.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2025A24.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003577967.12e-83PREDICTED: ocs element-binding factor 1-like
TrEMBLR7W9Q01e-111R7W9Q0_AEGTA; Ocs element-binding factor 1
TrEMBLW5FU921e-111W5FU92_WHEAT; Uncharacterized protein
STRINGMLOC_71104.22e-97(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37403276
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.19e-12basic leucine-zipper 44
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]